Package: statgenSTA 1.0.13

Bart-Jan van Rossum

statgenSTA: Single Trial Analysis (STA) of Field Trials

Phenotypic analysis of field trials using mixed models with and without spatial components. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris. Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (<https://vsni.co.uk/software/asreml-r>).

Authors:Bart-Jan van Rossum [aut, cre], Fred van Eeuwijk [ctb], Martin Boer [ctb], Marcos Malosetti [ctb], Daniela Bustos-Korts [ctb], Emilie J. Millet [ctb], Joao Paulo [ctb], Maikel Verouden [ctb], Willem Kruijer [ctb], Ron Wehrens [ctb], Choazhi Zheng [ctb]

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statgenSTA.pdf |statgenSTA.html
statgenSTA/json (API)
NEWS

# Install 'statgenSTA' in R:
install.packages('statgenSTA', repos = c('https://biometris.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/biometris/statgensta/issues

Datasets:
  • TDHeat05 - Field data for a wheat experiment in Mexico
  • TDMaize - Field data for a maize experiment in Tlaltizapan, Mexico
  • dropsRaw - DROPS data set

On CRAN:

geneticssingle-trial-analysis

11 exports 4 stars 1.96 score 54 dependencies 2 dependents 12 scripts 1.2k downloads

Last updated 5 months agofrom:5859f3eec3. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 03 2024
R-4.5-winNOTESep 03 2024
R-4.5-linuxNOTESep 03 2024
R-4.4-winNOTESep 03 2024
R-4.4-macNOTESep 03 2024
R-4.3-winNOTESep 03 2024
R-4.3-macNOTESep 03 2024

Exports:addTDcreateTDdropTDextractSTAfitTDgetMetaoutlierSTAreportsetMetaSTAtoCrossSTAtoTD

Dependencies:bootclicolorspacedata.tabledotCall64emmeansestimabilityevaluatefansifarverfieldsggplot2ggrepelgluegridExtragtablehighrisobandknitrlabelinglatticelifecyclelme4magrittrmapprojmapsMASSMatrixmgcvminqamunsellmvtnormnlmenloptrnumDerivpillarpkgconfigqtlR6RColorBrewerRcppRcppEigenrlangscalesspamSpATStibbleutf8vctrsviridisLitewithrxfunxtableyaml

Modeling field trials using statgenSTA

Rendered fromstatgenSTA.Rmdusingknitr::rmarkdownon Sep 03 2024.

Last update: 2022-06-24
Started: 2020-01-06