The statgenGxE package | Data preparation | Coloring of genotypes and trials | Mixed model analysis of GxE table of means | Model fitted with all terms as fixed | Model fitted with all terms as random | Mixed model | Finlay-Wilkinson Analysis | AMMI Analysis | GGE Analysis | Identifying mega environments | Stability measures | Modeling of heterogeneity of genetic variances and correlations | Fitted values and residuals | Reporting | References
Package: statgenGxE 1.0.11
Bart-Jan van Rossum
statgenGxE: Genotype by Environment (GxE) Analysis
Analysis of multi environment data of plant breeding experiments following the analyses described in Malosetti, Ribaut, and van Eeuwijk (2013), <doi:10.3389/fphys.2013.00044>. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris. Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (<https://vsni.co.uk/software/asreml-r/>).
Authors:
statgenGxE_1.0.11.tar.gz
statgenGxE_1.0.11.zip(r-4.7)statgenGxE_1.0.11.zip(r-4.6)statgenGxE_1.0.11.zip(r-4.5)
statgenGxE_1.0.11.tgz(r-4.6-any)statgenGxE_1.0.11.tgz(r-4.5-any)
statgenGxE_1.0.11.tar.gz(r-4.7-any)statgenGxE_1.0.11.tar.gz(r-4.6-any)
statgenGxE_1.0.11.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
statgenGxE/json (API)
| # Install 'statgenGxE' in R: |
| install.packages('statgenGxE', repos = c('https://biometris.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/biometris/statgengxe/issues
Datasets:
- dropsPheno - DROPS data set
- TDMaize - Field data for a maize experiment in Tlaltizapan, Mexico
geneticsgxegxe-modellingmulti-trial-analysis
Last updated from:2b6e3bf345. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 204 | ||
| source / vignettes | OK | 193 | ||
| linux-release-x86_64 | OK | 190 | ||
| macos-release-arm64 | OK | 166 | ||
| macos-oldrel-arm64 | OK | 162 | ||
| windows-devel | OK | 153 | ||
| windows-release | OK | 154 | ||
| windows-oldrel | OK | 158 | ||
| wasm-release | OK | 154 |
Exports:correlationsCRDRdiagnosticsgxeAmmigxeFwgxeGGEgxeMegaEnvgxeStabilitygxeVarCompgxeVarCovheritmultMissingreportvc
Dependencies:bootclicpp11data.tabledotCall64emmeansestimabilityevaluatefarverfieldsggplot2ggrepelgluegridExtragtablehighrisobandknitrlabelinglatticelifecyclelme4mapprojmapsMASSMatrixminqamvtnormnlmenloptrnumDerivqtlR6rbibutilsRColorBrewerRcppRcppEigenRdpackreformulasrlangS7scalesspamSpATSstatgenSTAvctrsviridisLitewithrxfunxtableyaml
